Why use ECToBlob? | Preparing the input data | (1) Gene trees (genedata) | Notes on gene trees | (2) A tree (tree) | Notes on the input tree | Initial analysis | Output plots | Note on computation | Combining quartet p-values | Multiple testing correction | Examples | Selecting a tree using the $\alpha$ threshold | Reporting recommendations | References

Why use NANUQ$^+$ routines? | Preparing the input data | Notes: | Step 1: Inferring the tree of blobs | Using NANUQ to explore whether multifurcations should be resolved into cycles | Note: | Step 2: Resolving multifurcations | Estimating numerical parameters and further comparing multiple optimal resolutions | References

Why use TINNIK? | Preparing the input data | Notes: | An initial analysis | Varying the test levels | Note: | References